Marine Science Experience

Summer 2003

Some Resources in the Biological literature


On this page:
1. Formulating a basic search strategy 5. Oceanography websites
2. Finding books 6. Lesson plans
3. Finding Articles: Indexes and Abstracts  7. Evaluating web resources
                Full text journals 8. Citing electronic and print information
4. California web sites 9. More web sites

 
Formulating a basic search strategy

Introduction

Choosing a topic/finding background information Web sites for online magazines. At most of these sites you can browse tables of contents for current and back issues. Some offer email alerting services, selected ful text articles and links for educators.
Occidental subscribes to many full text online journals that we also carry in print and there are some online journals that we do not have in print. To see a current list, visit our Full Text Journals page.
Some other journals in marine science you may find useful.
 
Title Location Call #
Bulletin of marine science First floor, periodicals GC1 .B8
Journal of experimental marine
biology and ecology
Ground floor, periodicals QH91.A1 J6
Marine biology Ground floor, periodicals QH91.A1 M35
Marine geology Ground floor, periodicals QE39 .M3
Marine ecology progress series Ground floor, periodicals QH541.5.S3 M26

ProQuest
    - Many full text articles with images. May be useful for background info such as Scientific American  and Natural History articles. You may browse the tables of contents of issues.
Titles of most of the earth sciences journals (many full text) in Proquest

 
Bioscience
Audubon
Canadian Journal of Botany
Canadian Journal of Chemistry
Canadian Journal of Earth Sciences
Canadian Journal of Fisheries and Aquatic Sciences
Canadian Journal of Microbiology
Canadian Journal of Physics
Canadian Journal of Zoology
Earth Island Journal
Earth Journal
Earth Science
Earth
Ecological Monographs
Ecology
Endangered Species Update
Environment
International Wildlife
Journal of Mammalogy
 Journal of Marine Research
Marine Biology
National Wildlife
Natural History
The American Midland Naturalist
The Condor
The Ecologist
Wilderness
Wildlife Conservation
Wildlife Monographs
Wildlife Society Bulletin
These are more journals which are mainly or almost entirely about biological diversity or ecology. Occidental does not subscribe to all these journals, but you may browse the tables of contents of issues using the Ingenta service.

Once you have an overview of your topic and some search terms, here is a helpful worksheet to develop your search strategy.
Using the worksheet, follow these steps:

   1.  Break research topic into concepts.
   2. Generate synonyms for each concept (an initial search can be a great help).
   3. Generate broader terms and categories.
   4. Generate narrower terms and limiters.
   5. Develop a search phrase.
   6. Refine your search based on results.
For a more detailed treatment of research strategies try these sites:
Identifying your topic from the Tisch Library and the Department of Biology of Tufts University

The Seven Steps of the Research Process How to Identify and Develop Your Topic from the Cornell university Library
 
Finding books

OASys
-  (the catalog of books and other material in the Occidental Library,) LINK+, Melvyl, and World Cat are all catalogs you may search for books (more info about finding books).OASys is the catalog of books and other material in the Occidental Library. A word search is usually a good way to start.
Although you may not wish to read or cite whole books, most will have useful and often extensive bibliographies which include references to articles.

Word Searches
     A word search is more general and selects any record that has your word in the title, subject headings, or notes.
Title Searches
     Search for journal titles to see if Occidental owns the journal.
Subject headings
     Subject headings which may prove useful in searching the online catalog or magazine indexes are:
  • Marine invertebrates -- Pacific Coast (U.S.)
  • Intertidal ecology -- Pacific Coast (U.S.)
  • Seashore biology -- Pacific Coast (U.S.)
  • Animals -- Habitations
  • Marine mammals -- California
  • Southern Marine mammals -- Pacific Ocean
  • Marine Ecology California
  • Finding Articles: Indexes and Abstracts

    Education:

    ERIC
        - combines CIJE and RIE into one electronic database. 1966- Available on FirstSearch.

    AskERIC (http://ericir.syr.edu/About/)
        - (available free on the web)  a personalized Internet-based service providing education information to teachers, librarians, counselors, administrators, parents, and others throughout the United States and the world.

    CIJE - Current Index to Journals in Education.  Phoenix, Ariz.: Oryx Press, 1975-
     (Journal articles)
      Reference Index Area   L 11 .A12 C87

    RIE - Resources in Education. Washington D.C.: U.S.G.P.O., 1975-
    (Reports, summaries, compilations, and curricular materials)
    Reference Index Backfile  ED 1.310:

    Thesaurus of ERIC Descriptors,12th ed. by James E. Houston. Phoenix, Ariz: Oryx Press, 1990.
     (Official vocabulary used in ERIC databases)
      Reference Index Area   Z 695.1 .E3 E3 1990

    Education Index. New York: H.W. Wilson, 1929-
     Reference Index Area    L 3 .E42
     Also available on FirstSearch as Education Abstracts, 1984-

    Biology

    BasicBIOSIS
        - on FirstSearch which indexes about 350 serial publications back to 1988 and is a subset of the full Biological Abstracts

    Biological and Agricultural Index
        - which indexes publications back to 1983.

    General Science Abstracts
        - 1984- General Science Index covers some 140 titles. Coverage includes astronomy, biology, botany, chemistry, earth science, environmental issues, mathematics, medicine, physics, and zoology.

    AGRICOLA
        - 1861- covers every major agricultural subject, including agricultural engineering and marketing, animal breeding, entomology, enFinding Articles: Indexes and Abstracts - Education: vironmental pollution, farm management, foods and feeds, pesticides, rural sociology, social sciences, veterinary medicine, and water resources.

    Geobase
        - Records covering the worldwide literature on geology, geography, and ecology.

    GeoRef
        - Records about geology and earth sciences from the American Geological Institute.

    Zoological Record (located in library reference index area) contains items relating to the natural biology of animals. -The index is divided into 20 sections such as: 6B - Annelida, 9- Mollusca, 15- Pices, 1-~-Reptilia and 19 - Mammalia as well as a comprehensive section.

    Finding full text articles
    The library has online subscriptions many online full text journals and connections can be made through OASys as well as from this page. Also see our Full Text Electronic Journals page for specific titles and to view the most recent additions of full text titles.     See also: Complete, Searchable Periodicals List  (Oxy Only)
    This searchable database combines what our library offers online with what it offers on paper.
     
    California web sites
    Specialized databases for California may also exist on the Web such as:

    Western Wetland Flora - Field Office Guide to Plant Species (http://www.npwrc.usgs.gov/resource/othrdata/westflor/westflor.htm)
        - Three hundred species of vascular plants. Information includes, photos, distribution maps, habitate and description

    CyberFlora California (http://www.calflora.org/content_overview.html)
        - is an experimental test of methods that allow merger of California flora biodiversity data sets, each searchable as an independent entity, into a single, searchable resource.

    California's Coastal Resources (http://ceres.ca.gov/ceres/calweb/coastal.html)
        - The California Environmental Resources Evaluation System - CERES - is an information system developed by the California Resources Agency to facilitate access to a variety of electronic data describing California's rich and diverse environments.

    Oceanography of the Southern California Bight (http://seis.natsci.csulb.edu/bperry/scbweb/homepage.htm)
        - This web site, the Oceanography of the Southern California Bight, exists to inform people interested in learning about the Pacific Ocean offshore of southern California. Found here are satellite and other images with accompanied by brief descriptive text passages that provide insights into the various natural and anthropogenic processes and phemomena that occur in this region. For now, there are sections on  CIRCULATION,   POLLUTION and BIOLOGY.features ongoing research by Paul M. DiGiacomo and Benjamin Holt

    Southern California Bight Study (http://coast.ocean.washington.edu/SouthernCal/CABS.html)
        - University of Washington data from research performed by Dr. Barbara Hickey and her staff at the University of Washington. This is a link on the Santa Barbara Channel - Santa Maria Basin Circulation Study
    Center for Coastal Studies (http://www-ccs.ucsd.edu/data.html)

    Scripps Institution of Oceanography  (http://www.sio.ucsd.edu/)
        - Home page has links to an "education area" as well as library and resources

    California Vegetation (http://endeavor.des.ucdavis.edu/cnps/)
        - A Manual of California Vegetation  from The California Native Plant Society
    You may especially be interested in the Field Sampling Protocol.
     
    Oceanography websites

        - At present, EOSDIS manages data from NASA's past and current Earth science research satellites and field measurement programs, providing data archiving, distribution, and information management services. To this end, EOSDIS provides a spectrum of services: some services are intended for a diversity of casual users, some are intended only for a select cadre of research scientists chosen by NASA's peer-reviewed competitions, and many fall somewhere in between these extremes. Try in particular the Educational Tools page whose links provide a wealth of information on tools related to Earth Science, of which EOSDIS is a major contributor

    EDUCATION RESOURCES FOR OCEANOGRAPHY AND EARTH SCIENCES (http://podaac.jpl.nasa.gov/edu/)
        - from The Physical Oceanography Distributed Active Archive Center (PO.DAAC), an element of the Earth Observing System Data Information System (EOSDIS), responsible for archiving and distributing data relevant to the physical state of the ocean.

    Joint Oceanographic Institutions (http://www.joi-odp.org) Joint Oceanographic Institutions (JOI) is a consortium of U.S. academic institutions which brings to bear the collective capabilities of the individual oceanographic institutions on research planning and management of the ocean sciences.
        - including ODP: From Mountains to Monsoons Teacher's Guide (PDF file)

    Academic Info - Oceanography (http://www.academicinfo.net/ocean.html)
        - An independent directory compiled by Mike Madin, a library specialist

    Bridge (http://www.vims.edu/bridge/)
        - online resources for marine science education from the Virginia Institute of Marine Science. See also the Bridge in the Lesson plans section below.

    National Oceanographic Data Center  (http://www.nodc.noaa.gov/)
        - The NODC holds physical, chemical, and biological oceanographic data collected by U.S. Federal agencies, including the Department of Defense (primarily the U.S. Navy); State, and local government agencies; universities and research institutions; and private industry

    Global Change Master Directory (GCMD) (http://gcmd.gsfc.nasa.gov/index.html)
        -NASA's GCMD is an online card catalog of data sets covering just about every scientific area of global change research. The Learning Center page of the GCMD is the place to go for all sorts of data and information about global environmental change.

    GeoData Information Sources (http://www.cgrer.uiowa.edu/servers/servers_geodata.html)
        -WWW sites (hundreds!) about digital cartographic and environmental data.Compiled by Mark MacLennan of the University of Iowa Center for Global & Regional Environmental Research

    UN Atlas of the Oceans (http://www.oceansatlas.com/index.jsp) Not only a data base, but a knowledge bank as well, the UN Atlas of the Oceans provides extensive information on the world's oceans and seas, gathered by various national and international agencies, including the United Nations; NOAA; and HDNO, the Russian Head Department of Navigation and Oceanography. Featuring maps, images, statistics, and other factual information gathered on the oceans, the site offers a sea of compelling topics, among them uses of the oceans and waterways, recreation and tourism, transportation and telecommunications, human coastal settlements, and the exploration and exploitation of natural resources. Also contained within the site are a number of stand-alone but interrelated modules about the oceans: how they were formed, how they are changing, and their dynamics. Sure to please curious minds are the site's depth profiles and its presentations on earthquakes, volcanoes, and tsunamis.

    Tides Online (http://www.co-ops.nos.noaa.gov/tidesonline)

    More data sources:

    Lesson plans

    The Bridge (http://www.vims.edu/bridge/lesson.html) Links to the lesson plans section. The Bridge is supported by the National Oceanographic Partnership Program, and is sponsored by the National Marine Educators Association and the national network of NOAA/Sea Grant educators. Links to numerous real-time data sets (http://www.vims.edu/bridge/data.html) which can be incorporated into your lesson plans.

    Sea Grant Marine Advisory Program, Virginia Institute of Marine Science (http://www.vims.edu/adv/ed/labact.html )

    NOAA's National Marine Sanctuary Program (http://www.sanctuaries.nos.noaa.gov/sse/education/activities/9to12activities.html) -Classroom Activities - Grades 9 to 12 The National Marine Sanctuary System is an office of the National Ocean Service, National Oceanic and Atmospheric Administration

    Ocean Planet exhibition (http://educate.si.edu/lessons/currkits/ocean/main.html), created by the Smithsonian Institution to share with the public what recent research has revealed about the oceans and to encourage ocean conservation. This online booklet of lessons and activities adapts several themes of the exhibition for use in the middle and high school classroom.

    DLESE  Digital Library for Earth System Education. It is a grassroots, community-based effort involving teachers, students, and scientists working together to create a library of educational resources and services to support Earth system science education.

    More web sites at the bottom of this page.
     
    Evaluating web resources(from Finding the "Good Stuff")

    The web has made it possible for anybody on the Internet to publish. Web sites rarely go
    through the exacting review process demanded by editors of print resources. It is
    therefore extremely important to critically evaluate information you find on the web.
    Ask yourself questions that take into account the purpose, authority, scope, accuracy,
    and presentation of the web site before deciding whether to use it in your research.

    Evaluation of information sources    (http://www.tufts.edu/~lsabol/eval.htm) - from the Tisch Library and the Department of Biology of Tufts University discusses the criteria in the list above and links to two other sources about evaluating web material. See in particular: The Good, The Bad & The Ugly: or, Why It's a Good Idea to Evaluate Web Sources/ Susan E. Beck: discusses criteria of Accuracy, Authority, Objectivity, Currency, Coverage, with links to examples, and
    Critical Evaluations Surveys/ Kathleen Schrock - criteria for elementary, middle, and secondary school levels.
    Evaluating Web Resources by by Jan Alexander and Marsha Ann Tate- this site provides modules and powerpoint presentations to aid in teaching about evalutatin web sites.
     
    Citing electronic and print information

    Writing Research Papers & Citing Sources from OWL - Online Writers Lab at Purdue University. Includes APA and MLA citation styles.

    The library owns many style manuals with extensive examples for citing articles, books, chapters and more.One current reference is:
    MLA style manual and guide to scholarly publishing / Joseph Gibaldi  in Reference   PN147 .G444 1998

    Finally, do not hesitate to ask Reference librarians for help.
     
    More web sites

    Berkeley Digital Library Project -
    (http://elib.cs.berkeley.edu/docs/)
    This collection includes documents, maps, articles, and reports on the California environment including Environmental Impact Reports (EIRs), educational pamphlets, water usage bulletins, and county plans. Documents in this collection come from the California Department of Water Resources (DWR), California Department of Fish and Game (DFG), San Diego Association of Governments (SANDAG), and other agencies.
    Oddyssey Expeditions Marine science courses (http://www.odysseyexpeditions.org/indexfh.asp) Internet quick courses on fish biology, ecology and more (commercial site)
    CSUBIOWEB
    (http://arnica.csustan.edu/index.html)
    CALIFORNIA STATE UNIVERSITY BIOLOGICAL SCIENCES WEB SERVER 
    Offers a table of biological topics, Click a button and retrieve web sites on that topic. Also creat a custom search.
    Hubbard's fish anatomy (http://www.nova.edu/~rlh/index.html)
    example of a personal web page
     anatomy of Freshwater Drum Aplodinotus grunniens Rafinesque and the Striped Bass Morone saxatilis.
    Seaweed
    (http://seaweed.ucg.ie/)
    From the National University of Ireland, Galway. Be sure to check out "Databases."
    Ecology, Biodiversity and the Environment
    (http://conbio.net/vl/)
    From the Virtual Library of Ecology and Biodiversity: A portion of the Center for Conservation Biology Network. Presents a broad list of links fron single species to habitats.
    Channel Islands National Marine Sanctuary
    (http://www.cinms.nos.noaa.gov/)
    From whale watching to maps
    Librarians' Index to the Internet  - Science
    (http://www.lii.org/search/file/science)
    The Librarians' Index to the Internet is a searchable, annotated subject directory of more than 7,900 Internet resources selected and evaluated by librarians for their usefulness to users of public libraries. It's meant to be used by both librarians and non-librarians as a reliable and efficient guide to described and evaluated Internet resources.
    Fishbase WWW
    (http://www.fishbase.org/search.html?server=IFM-Kiel)
    To date, the SPECIES table contains about half of the estimated 27,310 recent fishes. However, the table already includes all fish that are important to humans either as food, ornamental fish, sport or bait fish, or because they are threatened by or dangerous to humans. Search by scientific or common name. 

    Short descriptions, pictures, references 

    A CATALOG OF THE SPECIES OF FISHES
    (http://www.calacademy.org/research/ichthyology/species/)
    This is a preliminary version of a database containing about 53,500 described species and subspecies of fishes
    Education and Ocean/Coastal Information Resources 
    (http://www.usc.edu/dept/seagrant/)
    The Sea Grant Program at the University of Southern California's Hancock Institute for Marine Studies has served the Southern California coastal region for over 25 years, funding research, transferring results to government agencies and user groups, and providing information about marine resources, recreation and education to the public. Sea Grant research and outreach projects cover a broad spectrum of areas, with particular emphasis on topics related to the "Urban Ocean," USC Sea Grant's thematic focus.
    Biology 
    (http://www.library.ucsb.edu/subj/bio1.html)
    A list from University of California at Santa Barbara
    MBREF Subject Areas - http://life.bio.sunysb.edu/marinebio/subjectareas.html
    "MBWEB is an educational resource for marine biology students with reference lists organized by subject. Many other links are here including links to marine stations, tide information, and lots more!"
    Fish FAQ -
    (http://www.wh.whoi.edu/homepage/faq.html) 
    From Woods Hole: Questions about fish are answered in detail with good illustrations. 
    Marine Biology Biological Sciences Database -
    (http://www.calpoly.edu/delta.html)
    A database of short descriptions of mostly common marine organisms including: -- Arthropods. -- Birds. -- Enchinoderms. -- Fishes. -- Invertebrates. -- Mammals. -- Mollusks. -- Plants. -- and, Reptiles.
    The Cephalopod Page -
    http://is.dal.ca/~ceph/TCP/index.html 
    Includes: Taxonomy; Photographs and Information; Cephalopod Links; Mollusca Links; and References.
    NASA's Global Change Master Directory (GCMD) (http://gcmd.gsfc.nasa.gov/)  is a comprehensive directory of descriptions of data sets of relevance to global change research. The GCMD database includes descriptions of data sets (DIFs) covering climate change, the biosphere, hydrosphere & oceans, geology, geography, and human dimensions of global change.
    Selected Web Sites for Geoscientists
    (http://www-sul.stanford.edu/depts/branner/information/sel.geo.html)
    Prepared by Charlotte Derksen (Stanford University) of the Geoscience Information Society for the Geological Society of America Annual Meeting, November, 2001
    National Institute for the Environment (NIE).
    (http://www.cnie.org/)
    Links to environmental journals on the web, maps, laws, agencies research and much more.
    The Geological Society of America (http://www.geosociety.org/educate/resources.htm) Resources for Educators and Students
    USGS 7.5 Minute Topographic Maps of Selected
     Portions of California
    (http://130.166.124.2/canvatlas/description.htm)
    Generate maps online
    California Wild: Natural Sciences for Thinking Animals
    (http://research.calacademy.org/calwild/calwildsearch.html)
    previous title, Pacific Discovery
    The science and natural history magazine published by the California Academy of Sciences, features the  State's extraordinary biological and geographical diversity, The full text of articles published in issues from the Summer of 1996 to the present are available online, along with selected articles from 1994 and 1995. 
    The National Biological Information Infrastructure
    (http://www.nbii.gov/)
    (NBII) Clearinghouse is an initiative to help you locate, evaluate, and access biological data and  information from a distributed network of cooperating data and information sources.
    Integrated Taxonomic Information System
    (http://www.itis.usda.gov/plantproj/itis/index.html)
    Partnership of U.S., Canadian, and Mexican agencies, other organizations, and taxonomic specialists cooperating on the development of an on-line, scientifically credible, list of biological names focusing on the biota of North America.
    MORE websites from Rachel Van Wingerden (updated by Carlo Castro on 6/19/2001)
     
     
     

    Dian Teigler, Science Reference x2817
    July 8, 2002